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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0116s0037.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | B3 | ||||||||
Protein Properties | Length: 236aa MW: 27297.9 Da PI: 6.2317 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.6 | 1.7e-16 | 17 | 106 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 ffkv ++++r+ +p +f+ ++ g +++ l ++g++W+v+l + +++ ++t+GW+ Fvk+n ++ gDf+ Fkl+ + Kalax.0116s0037.1.p 17 FFKVY--IADHSLNRMKVPSEFV-DYmRGR-TCG-AAELAGLNGETWQVEL--AQEGKHLFFTDGWQTFVKENMVEHGDFLFFKLHCNLM 99 67777..455667889*******.662544.565.89**************..999999*************************987544 PP E..EEEEE- CS B3 90 felvvkvfr 98 f v +f+ Kalax.0116s0037.1.p 100 F--SVVIFD 106 4..666665 PP | |||||||
2 | B3 | 49.3 | 8.6e-16 | 136 | 218 | 13 | 99 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++p f+ e + + + ++++l++ + sW+v+l ++ +y l +GW Fv++n++kegD++ F+l++ + e++v++ r+ Kalax.0116s0037.1.p 136 GAKPYIPTWFIGEDSVHHDRLQKMVLRTDEDSSWSVNL--HHSQHKYRLYGGWAVFVRDNNIKEGDTCKFELVN--RLEMKVHIMRR 218 55567888888777555667789***************..888888*************************976..77789999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 4.9E-20 | 11 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.5E-20 | 11 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 12.999 | 15 | 108 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.54E-15 | 15 | 106 | No hit | No description |
SMART | SM01019 | 1.5E-10 | 17 | 108 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.8E-14 | 17 | 106 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 12.421 | 124 | 219 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.52E-12 | 127 | 215 | No hit | No description |
SMART | SM01019 | 6.0E-5 | 128 | 219 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.9E-18 | 134 | 219 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.35E-17 | 139 | 219 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.5E-13 | 140 | 218 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MRIDVEEEAD TDNLPEFFKV YIADHSLNRM KVPSEFVDYM RGRTCGAAEL AGLNGETWQV 60 ELAQEGKHLF FTDGWQTFVK ENMVEHGDFL FFKLHCNLMF SVVIFDETMC EKGVTLGAKS 120 SRGRDGVLEA EKVQNGAKPY IPTWFIGEDS VHHDRLQKMV LRTDEDSSWS VNLHHSQHKY 180 RLYGGWAVFV RDNNIKEGDT CKFELVNRLE MKVHIMRRSK TPSLHSPVKN HDLISE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 3e-15 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0116s0037.1.p |